Skip to content
View feldroop's full-sized avatar
๐Ÿ™‚
Hackin' around
๐Ÿ™‚
Hackin' around
  • TNG Technology Consulting
  • Berlin
  • 01:00 (UTC +01:00)
  • LinkedIn in/felix-droop

Organizations

@seqan

Block or report feldroop

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this userโ€™s behavior. Learn more about reporting abuse.

Report abuse
feldroop/README.md

Hey, I'm Felix. Welcome to my profile! ๐Ÿ ๐ŸŒณ

Notable projects

  • genedex - A fast, memory-efficent and easy-to-use implementation of the FM-Index in Rust.
  • libsais-rs - Idiomatic and mostly safe API bindings to allow using the C library libsais conveniently from Rust.
  • floxer - For my master's thesis, I developed a CLI tool in C++ that solves a common algorithmic problem in bioinformatics similar to sequence search. The tool is based on the FM-Index data structure and employs a task-based parallelism scheme. code thesis pdf
  • chopper - For my bachelor's thesis, I contributed to a tool that performs the preprocessing for a data structure based on Bloom Filters. I improved the algorithm by integrating set cardinality estimates from HyperLogLog sketches. code thesis pdf

Pinned Loading

  1. genedex genedex Public

    A small and fast FM-Index for Rust

    Rust 38

  2. libsais-rs libsais-rs Public

    Rust bindings to libsais

    Rust 5

  3. floxer floxer Public

    FM-index longread PEX-based aligner

    C++ 4

  4. sais-drum sais-drum Public

    The SAIS suffix array construction algorithm in Rust

    Rust 1

  5. rust-fmindex-benchmark rust-fmindex-benchmark Public

    Rust 1

  6. crates-io-saca-benchmark crates-io-saca-benchmark Public

    Rust 2