Fixing few formatting issues

Author: aterrel

examples/intro/06_simple_plot.py

@@ -7,4 +7,5 @@
 pl.plot(X, C)
 pl.plot(X, S)
 
-pl.show()
+#pl.show()
+pl.savefig("foo.png")

html/intro.html

@@ -15,7 +15,7 @@
 
 
         <link rel="stylesheet" href="css/reveal.css">
-        <link rel="stylesheet" href="css/theme/default.css" id="theme">
+        <link rel="stylesheet" href="css/theme/serif.css" id="theme">
 
         <!-- For syntax highlighting -->
         <link rel="stylesheet" href="lib/css/xcode.css">

markdown/intro/building_blocks.md

@@ -27,9 +27,9 @@ that can be combined to obtain a scientific computing environment:
 
 
 
-    ![image](/figures/intro/snapshot_ipython.png)  
+    ![image](../figures/intro/snapshot_ipython.png)  
 -   **IPython**, an advanced **Python shell**
-    [http://ipython.scipy.org/moin](http://ipython.scipy.org/moin)/
+    [http://ipython.org](http://ipython.org)/
 
 
 
@@ -45,9 +45,9 @@ that can be combined to obtain a scientific computing environment:
 
 
 
-    ![image](/figures/intro/random_c.jpg)  
+    ![image](../figures/intro/random_c.jpg)  
 -   **Matplotlib** : 2-D visualization, "publication-ready" plots
-    [http://matplotlib.sourceforge.net](http://matplotlib.sourceforge.net)/
+    [http://matplotlib.org/](http://matplotlib.org/)
 
 
 
@@ -60,14 +60,17 @@ that can be combined to obtain a scientific computing environment:
     [http://pandas.pydata.org](http://pandas.pydata.org)
 
 
--   **PyTables**:
 
+-   **PyTables**: Very large on node files and operations
+    [http://www.pytables.org/](http://www.pytables.org/)
 
 
--   **Cython**:
 
+-   **Cython**: Compile Typed Python to C and call C functions
+    [http://cython.org/](http://cython.org/)
 
 
-    ![image](/figures/intro/example_surface_from_irregular_data.jpg)  
+
+    ![image](../figures/intro/example_surface_from_irregular_data.jpg)  
 -   **Mayavi** : 3-D visualization
     [http://code.enthought.com/projects/mayavi](http://code.enthought.com/projects/mayavi)/

markdown/intro/intro.md

@@ -1,6 +1,3 @@
-Introduction
-============
-
 Introduction to Python
 ------------
 
@@ -13,3 +10,12 @@ a computational scientist.
 
 
 
+### Sources
+
+- Scipy Lectures [http://scipy-lectures.github.io](scipy-lectures.github.io)
+- Software Carpentry [https://github.com/swcarpentry/boot-camps](https://github.com/swcarpentry/boot-camps)
+  
+### See also
+
+- Scipy Conference Tutorials:  [http://conference.scipy.org/scipy2013/tutorials_schedule.php](http://conference.scipy.org/scipy2013/tutorials_schedule.php)
+  

markdown/intro/matplotlib.md

@@ -9,7 +9,7 @@ Matplotlib - Plotting
 
 
 Simple plot  
-<img src="/figures/intro/simple_plot.png" style="width: 600px;"/>
+<img src="../figures/intro/simple_plot.png" style="width: 600px;"/>
 ```python
 import pylab as pl
 import numpy as np
@@ -49,7 +49,7 @@ pl.show()
 
 
 Change linestyles  
-<img src="/figures/intro/simple_plot_cust.png" style="width: 600px;"/>
+<img src="../figures/intro/simple_plot_cust.png" style="width: 600px;"/>
 ```python
 pl.figure(figsize=(10, 6), dpi=80)
 pl.plot(X, C, color="blue", linewidth=2.5, linestyle="-")
@@ -59,7 +59,7 @@ pl.plot(X, S, color="red",  linewidth=2.5, linestyle="-")
 
 
 Adding legend  
-<img src="/figures/intro/simple_plot_legend.png" style="width: 600px;"/>
+<img src="../figures/intro/simple_plot_legend.png" style="width: 600px;"/>
 ```python
 pl.plot(X, C, color="blue", linewidth=2.5, linestyle="-", label="cosine")
 pl.plot(X, S, color="green", linewidth=2.5, linestyle="--", label="sine") # Set x limits
@@ -69,7 +69,7 @@ pl.legend(loc='upper left')
 
 
 Moving splines  
-<img src="/figures/intro/simple_plot_cust2.png" style="width: 600px;"/>
+<img src="../figures/intro/simple_plot_cust2.png" style="width: 600px;"/>
 ```python
 ax = pl.gca() # gca stands for 'get current axis'
 ax.spines['right'].set_color('none') 
@@ -83,7 +83,7 @@ ax.spines['left'].set_position(('data',0))
 
 
 Histograms  
-<img src="/figures/intro/hist.png" style="width: 600px;"/>
+<img src="../figures/intro/hist.png" style="width: 600px;"/>
 
 ```python
 import pylab as pl
@@ -95,7 +95,7 @@ pl.show()
 
 
 Add a fit line and legend  
-<img src="/figures/intro/hist_legend_fit.png" style="width: 600px;"/>
+<img src="../figures/intro/hist_legend_fit.png" style="width: 600px;"/>
 ```python
 n, bins, patches = pl.hist(pl.randn(1000), 40, normed=1)
 l, = pl.plot(bins, pl.normpdf(bins, 0.0, 1.0), 'r--', label='fit', linewidth=3)
@@ -104,20 +104,22 @@ legend([l, patches[0]], ['fit', 'hist'])
 
 
 
-Other types of plots include  
-- Scatter
-- Bar
-- Pie
-- Sankey
-- Images
-- Quivers
-- Multiplots
-- Polar 
-- 3D 
+Other types of plots include:
+
+*  Scatter
+*  Bar
+*  Pie
+*  Sankey
+*  Images
+*  Quivers
+*  Multiplots
+*  Polar 
+*  3D 
 
 
 
 Other elements to know about:
+
 - Ticks: control how the ticks look
 - Annotations: Add visual elements to your plot
 - Axes: draw plots on top of themselves

markdown/intro/numpy.md

@@ -4,7 +4,7 @@ NumPy
 Python library that provides multi-dimensional arrays, tables, and matrices for Python
 
 <center>
-![image](/figures/intro/array1D.2.lightbg.png)
+![image](../figures/intro/array1D.2.lightbg.png)
 </center>
 
 - Contiguous or strided arrays
@@ -31,7 +31,7 @@ Python library that provides multi-dimensional arrays, tables, and matrices for
 ### NumPy Ecosystem
 
 <center>
-![image](/figures/intro/ecosystem.lightbg.png)
+![image](../figures/intro/ecosystem.lightbg.png)
 </center>