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@DiseaseTranscriptomicsLab

Disease Transcriptomics Lab

Group of researchers at the Gulbenkian Institute for Molecular Medicine

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  1. betAS betAS Public

    Intuitive analysis and visualisation of differential alternative splicing based on beta distributions.

    R 11 4

  2. compbio-app-server compbio-app-server Public

    CompBio app server to host Python and R Shiny web apps

    HTML 7 4

  3. scStudio scStudio Public

    A User-Friendly Web Application for Intuitive and Comprehensive scRNA-seq Data Analysis

    R 7 2

  4. markeR markeR Public

    🧬 Toolkit for Evaluating Gene Sets as Phenotype Markers in R

    R 5

  5. voyAGEr voyAGEr Public

    ⏳ Online graphical interface to explore age-related gene expression alterations in 49 GTEx human tissues

    HTML 2 1

  6. CHARM CHARM Public

    Comprehensive Hub for Alternative Regulatory Mapping

    R 2

Repositories

Showing 10 of 10 repositories
  • CHARM Public

    Comprehensive Hub for Alternative Regulatory Mapping

    DiseaseTranscriptomicsLab/CHARM’s past year of commit activity
    R 2 MIT 0 0 0 Updated Nov 7, 2025
  • markeR Public

    🧬 Toolkit for Evaluating Gene Sets as Phenotype Markers in R

    DiseaseTranscriptomicsLab/markeR’s past year of commit activity
    R 5 0 6 1 Updated Nov 6, 2025
  • scStudio Public

    A User-Friendly Web Application for Intuitive and Comprehensive scRNA-seq Data Analysis

    DiseaseTranscriptomicsLab/scStudio’s past year of commit activity
    R 7 2 0 0 Updated Nov 3, 2025
  • StressGranules Public

    This repository contains the analyses pertaining to {insert doi}

    DiseaseTranscriptomicsLab/StressGranules’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 2, 2025
  • voyAGEr Public

    ⏳ Online graphical interface to explore age-related gene expression alterations in 49 GTEx human tissues

    DiseaseTranscriptomicsLab/voyAGEr’s past year of commit activity
    HTML 2 1 1 0 Updated Jul 14, 2025
  • Template_PhDTheses_FMUL Public

    Template for PhD Theses from FMUL

    DiseaseTranscriptomicsLab/Template_PhDTheses_FMUL’s past year of commit activity
    BibTeX Style 1 1 0 0 Updated Jul 1, 2025
  • compbio-app-server Public

    CompBio app server to host Python and R Shiny web apps

    DiseaseTranscriptomicsLab/compbio-app-server’s past year of commit activity
    HTML 7 MIT 4 1 0 Updated May 30, 2025
  • MuscleImmuneAging Public

    Supplementary files related to the methods used to analyze scRNA-seq data from the Sousa et al. paper, "The Immune Landscape of Murine Skeletal Muscle Regeneration and Aging.".

    DiseaseTranscriptomicsLab/MuscleImmuneAging’s past year of commit activity
    HTML 1 1 0 0 Updated Jan 3, 2025
  • MCT Public

    Scripts used for data analysis in the manuscript: "Sustained macrophage reprogramming is required for CD8 T cell-dependent long-term tumor resolution"

    DiseaseTranscriptomicsLab/MCT’s past year of commit activity
    HTML 0 1 0 0 Updated Jan 2, 2025
  • betAS Public

    Intuitive analysis and visualisation of differential alternative splicing based on beta distributions.

    DiseaseTranscriptomicsLab/betAS’s past year of commit activity
    R 11 4 0 0 Updated Apr 23, 2024

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